UCT HPC cluster

JOB DETAILS FOR JOB 70135

captured Sun Feb 9 17:51:01 SAST 2025

MaxRAM=0G
MaxVMSize=0G
AveCPUFreq=
AveDiskRead=
AveDiskWrite=

JobId=70135 JobName=nf-deepVariantCaller_(Writing_genotypes_to_{bamName}.g.vcf.gz )
   UserId=eshkev001(733301741) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7105 Nice=0 Account=humgen QOS=normal
   JobState=RUNNING Reason=None Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=0:0
   DerivedExitCode=0:0
   RunTime=00:17:21 TimeLimit=2-12:00:00 TimeMin=N/A
   SubmitTime=2025-02-09T17:33:40 EligibleTime=2025-02-09T17:33:40
   AccrueTime=2025-02-09T17:33:40
   StartTime=2025-02-09T17:33:40 EndTime=2025-02-12T05:33:40 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-02-09T17:33:40 Scheduler=Main
   Partition=sadacc AllocNode:Sid=srvrochpc228:1413650
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc228
   BatchHost=srvrochpc228
   NumNodes=1 NumCPUs=10 NumTasks=1 CPUs/Task=10 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=100G,node=1,billing=20
   AllocTRES=cpu=10,mem=100G,node=1,billing=20
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc228 CPU_IDs=1-10 Mem=102400 GRES=
   MinCPUsNode=13 MinMemoryNode=100G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee
   StdErr=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee/.command.log
   StdIn=/dev/null
   StdOut=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee/.command.log
   Power=
   TresPerTask=cpu:10

UCT HPC clusterJOB DETAILS FOR JOB 70135

captured Sun Feb 9 17:51:32 SAST 2025

JobId=70135 JobName=nf-deepVariantCaller_(Writing_genotypes_to_{bamName}.g.vcf.gz )
   UserId=eshkev001(733301741) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7105 Nice=0 Account=humgen QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=250:0
   DerivedExitCode=0:0
   RunTime=00:17:21 TimeLimit=2-12:00:00 TimeMin=N/A
   SubmitTime=2025-02-09T17:33:40 EligibleTime=2025-02-09T17:33:40
   AccrueTime=2025-02-09T17:33:40
   StartTime=2025-02-09T17:33:40 EndTime=2025-02-09T17:51:01 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-02-09T17:33:40 Scheduler=Main
   Partition=sadacc AllocNode:Sid=srvrochpc228:1413650
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc228
   BatchHost=srvrochpc228
   NumNodes=1 NumCPUs=10 NumTasks=1 CPUs/Task=10 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=100G,node=1,billing=20
   AllocTRES=cpu=10,mem=100G,node=1,billing=20
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc228 CPU_IDs=1-10 Mem=102400 GRES=
   MinCPUsNode=13 MinMemoryNode=100G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee
   StdErr=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee/.command.log
   StdIn=/dev/null
   StdOut=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee/.command.log
   Power=
   TresPerTask=cpu:10

UCT HPC clusterJOB DETAILS FOR JOB 70135

captured Sun Feb 9 17:52:02 SAST 2025

JobId=70135 JobName=nf-deepVariantCaller_(Writing_genotypes_to_{bamName}.g.vcf.gz )
   UserId=eshkev001(733301741) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7105 Nice=0 Account=humgen QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=250:0
   DerivedExitCode=0:0
   RunTime=00:17:21 TimeLimit=2-12:00:00 TimeMin=N/A
   SubmitTime=2025-02-09T17:33:40 EligibleTime=2025-02-09T17:33:40
   AccrueTime=2025-02-09T17:33:40
   StartTime=2025-02-09T17:33:40 EndTime=2025-02-09T17:51:01 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-02-09T17:33:40 Scheduler=Main
   Partition=sadacc AllocNode:Sid=srvrochpc228:1413650
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc228
   BatchHost=srvrochpc228
   NumNodes=1 NumCPUs=10 NumTasks=1 CPUs/Task=10 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=100G,node=1,billing=20
   AllocTRES=cpu=10,mem=100G,node=1,billing=20
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc228 CPU_IDs=1-10 Mem=102400 GRES=
   MinCPUsNode=13 MinMemoryNode=100G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee
   StdErr=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee/.command.log
   StdIn=/dev/null
   StdOut=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee/.command.log
   Power=
   TresPerTask=cpu:10

UCT HPC clusterJOB DETAILS FOR JOB 70135

captured Sun Feb 9 17:52:33 SAST 2025

JobId=70135 JobName=nf-deepVariantCaller_(Writing_genotypes_to_{bamName}.g.vcf.gz )
   UserId=eshkev001(733301741) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7105 Nice=0 Account=humgen QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=250:0
   DerivedExitCode=0:0
   RunTime=00:17:21 TimeLimit=2-12:00:00 TimeMin=N/A
   SubmitTime=2025-02-09T17:33:40 EligibleTime=2025-02-09T17:33:40
   AccrueTime=2025-02-09T17:33:40
   StartTime=2025-02-09T17:33:40 EndTime=2025-02-09T17:51:01 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-02-09T17:33:40 Scheduler=Main
   Partition=sadacc AllocNode:Sid=srvrochpc228:1413650
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc228
   BatchHost=srvrochpc228
   NumNodes=1 NumCPUs=10 NumTasks=1 CPUs/Task=10 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=100G,node=1,billing=20
   AllocTRES=cpu=10,mem=100G,node=1,billing=20
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc228 CPU_IDs=1-10 Mem=102400 GRES=
   MinCPUsNode=13 MinMemoryNode=100G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee
   StdErr=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee/.command.log
   StdIn=/dev/null
   StdOut=/scratch/eshkev001/nfworkdirs/wgst2t/45/f53eb9e8ee46e7131709886af31dee/.command.log
   Power=
   TresPerTask=cpu:10