UCT HPC cluster

JOB DETAILS FOR JOB 59012

captured Fri Dec 20 13:57:01 SAST 2024

MaxRAM=31.2G
MaxVMSize=0G
AveCPUFreq=4M
AveDiskRead=24604948782
AveDiskWrite=16601623523

JobId=59012 JobName=rnaseq_processed
   UserId=01461276(1221873386 Sonwa Dzanibe) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7361 Nice=0 Account=pathology QOS=normal
   JobState=RUNNING Reason=None Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=0:0
   DerivedExitCode=0:0
   RunTime=00:03:56 TimeLimit=2-12:00:00 TimeMin=N/A
   SubmitTime=2024-12-20T13:53:05 EligibleTime=2024-12-20T13:53:05
   AccrueTime=2024-12-20T13:53:05
   StartTime=2024-12-20T13:53:05 EndTime=2024-12-23T01:53:05 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-12-20T13:53:05 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc100.uct.ac.za:4063961
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc100
   BatchHost=srvrochpc100
   NumNodes=1 NumCPUs=10 NumTasks=10 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80000M,node=1,billing=17
   AllocTRES=cpu=10,mem=80000M,node=1,billing=17
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc100 CPU_IDs=3,14-17,26-27,38-40 Mem=80000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/01461276/rna_seq/rna_seq.sh
   WorkDir=/scratch/01461276/rna_seq
   StdErr=/scratch/01461276/rna_seq/slurm-59012.out
   StdIn=/dev/null
   StdOut=/scratch/01461276/rna_seq/slurm-59012.out
   Power=
   MailUser=s.dzanibe@uct.ac.za MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 59012

captured Fri Dec 20 13:57:37 SAST 2024

JobId=59012 JobName=rnaseq_processed
   UserId=01461276(1221873386 Sonwa Dzanibe) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7361 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:04:19 TimeLimit=2-12:00:00 TimeMin=N/A
   SubmitTime=2024-12-20T13:53:05 EligibleTime=2024-12-20T13:53:05
   AccrueTime=2024-12-20T13:53:05
   StartTime=2024-12-20T13:53:05 EndTime=2024-12-20T13:57:24 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-12-20T13:53:05 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc100.uct.ac.za:4063961
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc100
   BatchHost=srvrochpc100
   NumNodes=1 NumCPUs=10 NumTasks=10 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80000M,node=1,billing=17
   AllocTRES=cpu=10,mem=80000M,node=1,billing=17
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc100 CPU_IDs=3,14-17,26-27,38-40 Mem=80000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/01461276/rna_seq/rna_seq.sh
   WorkDir=/scratch/01461276/rna_seq
   StdErr=/scratch/01461276/rna_seq/slurm-59012.out
   StdIn=/dev/null
   StdOut=/scratch/01461276/rna_seq/slurm-59012.out
   Power=
   MailUser=s.dzanibe@uct.ac.za MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 59012

captured Fri Dec 20 13:58:01 SAST 2024

JobId=59012 JobName=rnaseq_processed
   UserId=01461276(1221873386 Sonwa Dzanibe) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7361 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:04:19 TimeLimit=2-12:00:00 TimeMin=N/A
   SubmitTime=2024-12-20T13:53:05 EligibleTime=2024-12-20T13:53:05
   AccrueTime=2024-12-20T13:53:05
   StartTime=2024-12-20T13:53:05 EndTime=2024-12-20T13:57:24 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-12-20T13:53:05 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc100.uct.ac.za:4063961
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc100
   BatchHost=srvrochpc100
   NumNodes=1 NumCPUs=10 NumTasks=10 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80000M,node=1,billing=17
   AllocTRES=cpu=10,mem=80000M,node=1,billing=17
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc100 CPU_IDs=3,14-17,26-27,38-40 Mem=80000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/01461276/rna_seq/rna_seq.sh
   WorkDir=/scratch/01461276/rna_seq
   StdErr=/scratch/01461276/rna_seq/slurm-59012.out
   StdIn=/dev/null
   StdOut=/scratch/01461276/rna_seq/slurm-59012.out
   Power=
   MailUser=s.dzanibe@uct.ac.za MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 59012

captured Fri Dec 20 13:58:37 SAST 2024

JobId=59012 JobName=rnaseq_processed
   UserId=01461276(1221873386 Sonwa Dzanibe) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7361 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:04:19 TimeLimit=2-12:00:00 TimeMin=N/A
   SubmitTime=2024-12-20T13:53:05 EligibleTime=2024-12-20T13:53:05
   AccrueTime=2024-12-20T13:53:05
   StartTime=2024-12-20T13:53:05 EndTime=2024-12-20T13:57:24 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-12-20T13:53:05 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc100.uct.ac.za:4063961
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc100
   BatchHost=srvrochpc100
   NumNodes=1 NumCPUs=10 NumTasks=10 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80000M,node=1,billing=17
   AllocTRES=cpu=10,mem=80000M,node=1,billing=17
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc100 CPU_IDs=3,14-17,26-27,38-40 Mem=80000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/01461276/rna_seq/rna_seq.sh
   WorkDir=/scratch/01461276/rna_seq
   StdErr=/scratch/01461276/rna_seq/slurm-59012.out
   StdIn=/dev/null
   StdOut=/scratch/01461276/rna_seq/slurm-59012.out
   Power=
   MailUser=s.dzanibe@uct.ac.za MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 59012

captured Fri Dec 20 13:59:01 SAST 2024

JobId=59012 JobName=rnaseq_processed
   UserId=01461276(1221873386 Sonwa Dzanibe) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7361 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:04:19 TimeLimit=2-12:00:00 TimeMin=N/A
   SubmitTime=2024-12-20T13:53:05 EligibleTime=2024-12-20T13:53:05
   AccrueTime=2024-12-20T13:53:05
   StartTime=2024-12-20T13:53:05 EndTime=2024-12-20T13:57:24 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-12-20T13:53:05 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc100.uct.ac.za:4063961
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc100
   BatchHost=srvrochpc100
   NumNodes=1 NumCPUs=10 NumTasks=10 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80000M,node=1,billing=17
   AllocTRES=cpu=10,mem=80000M,node=1,billing=17
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc100 CPU_IDs=3,14-17,26-27,38-40 Mem=80000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/01461276/rna_seq/rna_seq.sh
   WorkDir=/scratch/01461276/rna_seq
   StdErr=/scratch/01461276/rna_seq/slurm-59012.out
   StdIn=/dev/null
   StdOut=/scratch/01461276/rna_seq/slurm-59012.out
   Power=
   MailUser=s.dzanibe@uct.ac.za MailType=BEGIN,END,FAIL