JOB DETAILS FOR JOB 52405

captured Wed Nov 20 21:02:01 SAST 2024

MaxRAM=1.4G
MaxVMSize=0G
AveCPUFreq=3.30M
AveDiskRead=9609150826
AveDiskWrite=50185590

JobId=52405 JobName=checking
   UserId=thnthi002(465176414 Thina Gcobo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7258 Nice=0 Account=pathology QOS=normal
   JobState=RUNNING Reason=None Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=0:0
   DerivedExitCode=0:0
   RunTime=00:03:34 TimeLimit=3-18:00:00 TimeMin=N/A
   SubmitTime=2024-11-20T20:58:27 EligibleTime=2024-11-20T20:58:27
   AccrueTime=2024-11-20T20:58:27
   StartTime=2024-11-20T20:58:27 EndTime=2024-11-24T14:58:27 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-11-20T20:58:27 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:967572
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc102
   BatchHost=srvrochpc102
   NumNodes=1 NumCPUs=4 NumTasks=4 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=32000M,node=1,billing=7
   AllocTRES=cpu=4,mem=32000M,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc102 CPU_IDs=29,39-41 Mem=32000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/thnthi002/haplotype_caller/validate.sh
   WorkDir=/scratch/thnthi002/haplotype_caller
   StdErr=/scratch/thnthi002/haplotype_caller/slurm-52405.out
   StdIn=/dev/null
   StdOut=/scratch/thnthi002/haplotype_caller/slurm-52405.out
   Power=
UCT HPC clusterJOB DETAILS FOR JOB 52405

captured Wed Nov 20 21:02:37 SAST 2024

JobId=52405 JobName=checking
   UserId=thnthi002(465176414 Thina Gcobo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7258 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=3:0
   DerivedExitCode=0:0
   RunTime=00:03:59 TimeLimit=3-18:00:00 TimeMin=N/A
   SubmitTime=2024-11-20T20:58:27 EligibleTime=2024-11-20T20:58:27
   AccrueTime=2024-11-20T20:58:27
   StartTime=2024-11-20T20:58:27 EndTime=2024-11-20T21:02:26 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-11-20T20:58:27 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:967572
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc102
   BatchHost=srvrochpc102
   NumNodes=1 NumCPUs=4 NumTasks=4 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=32000M,node=1,billing=7
   AllocTRES=cpu=4,mem=32000M,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc102 CPU_IDs=29,39-41 Mem=32000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/thnthi002/haplotype_caller/validate.sh
   WorkDir=/scratch/thnthi002/haplotype_caller
   StdErr=/scratch/thnthi002/haplotype_caller/slurm-52405.out
   StdIn=/dev/null
   StdOut=/scratch/thnthi002/haplotype_caller/slurm-52405.out
   Power=
UCT HPC clusterJOB DETAILS FOR JOB 52405

captured Wed Nov 20 21:03:01 SAST 2024

JobId=52405 JobName=checking
   UserId=thnthi002(465176414 Thina Gcobo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7258 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=3:0
   DerivedExitCode=0:0
   RunTime=00:03:59 TimeLimit=3-18:00:00 TimeMin=N/A
   SubmitTime=2024-11-20T20:58:27 EligibleTime=2024-11-20T20:58:27
   AccrueTime=2024-11-20T20:58:27
   StartTime=2024-11-20T20:58:27 EndTime=2024-11-20T21:02:26 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-11-20T20:58:27 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:967572
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc102
   BatchHost=srvrochpc102
   NumNodes=1 NumCPUs=4 NumTasks=4 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=32000M,node=1,billing=7
   AllocTRES=cpu=4,mem=32000M,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc102 CPU_IDs=29,39-41 Mem=32000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/thnthi002/haplotype_caller/validate.sh
   WorkDir=/scratch/thnthi002/haplotype_caller
   StdErr=/scratch/thnthi002/haplotype_caller/slurm-52405.out
   StdIn=/dev/null
   StdOut=/scratch/thnthi002/haplotype_caller/slurm-52405.out
   Power=
UCT HPC clusterJOB DETAILS FOR JOB 52405

captured Wed Nov 20 21:03:36 SAST 2024

JobId=52405 JobName=checking
   UserId=thnthi002(465176414 Thina Gcobo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7258 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=3:0
   DerivedExitCode=0:0
   RunTime=00:03:59 TimeLimit=3-18:00:00 TimeMin=N/A
   SubmitTime=2024-11-20T20:58:27 EligibleTime=2024-11-20T20:58:27
   AccrueTime=2024-11-20T20:58:27
   StartTime=2024-11-20T20:58:27 EndTime=2024-11-20T21:02:26 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-11-20T20:58:27 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:967572
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc102
   BatchHost=srvrochpc102
   NumNodes=1 NumCPUs=4 NumTasks=4 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=32000M,node=1,billing=7
   AllocTRES=cpu=4,mem=32000M,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc102 CPU_IDs=29,39-41 Mem=32000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/thnthi002/haplotype_caller/validate.sh
   WorkDir=/scratch/thnthi002/haplotype_caller
   StdErr=/scratch/thnthi002/haplotype_caller/slurm-52405.out
   StdIn=/dev/null
   StdOut=/scratch/thnthi002/haplotype_caller/slurm-52405.out
   Power=
UCT HPC clusterJOB DETAILS FOR JOB 52405

captured Wed Nov 20 21:04:02 SAST 2024

JobId=52405 JobName=checking
   UserId=thnthi002(465176414 Thina Gcobo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7258 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=3:0
   DerivedExitCode=0:0
   RunTime=00:03:59 TimeLimit=3-18:00:00 TimeMin=N/A
   SubmitTime=2024-11-20T20:58:27 EligibleTime=2024-11-20T20:58:27
   AccrueTime=2024-11-20T20:58:27
   StartTime=2024-11-20T20:58:27 EndTime=2024-11-20T21:02:26 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-11-20T20:58:27 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:967572
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc102
   BatchHost=srvrochpc102
   NumNodes=1 NumCPUs=4 NumTasks=4 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=32000M,node=1,billing=7
   AllocTRES=cpu=4,mem=32000M,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc102 CPU_IDs=29,39-41 Mem=32000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/thnthi002/haplotype_caller/validate.sh
   WorkDir=/scratch/thnthi002/haplotype_caller
   StdErr=/scratch/thnthi002/haplotype_caller/slurm-52405.out
   StdIn=/dev/null
   StdOut=/scratch/thnthi002/haplotype_caller/slurm-52405.out
   Power=