UCT HPC cluster

JOB DETAILS FOR JOB 37459

captured Tue Oct 22 12:02:02 SAST 2024

MaxRAM=32.7G
MaxVMSize=0G
AveCPUFreq=18K
AveDiskRead=20860109242
AveDiskWrite=59476812051

JobId=37459 JobName=Alignment
   UserId=thnthi002(465176414 Thina Gcobo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7133 Nice=0 Account=pathology QOS=normal
   JobState=RUNNING Reason=None Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=0:0
   DerivedExitCode=0:0
   RunTime=02:13:12 TimeLimit=3-18:00:00 TimeMin=N/A
   SubmitTime=2024-10-22T09:48:50 EligibleTime=2024-10-22T09:48:50
   AccrueTime=2024-10-22T09:48:50
   StartTime=2024-10-22T09:48:50 EndTime=2024-10-26T03:48:50 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-10-22T09:48:50 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:2489001
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc103
   BatchHost=srvrochpc103
   NumNodes=1 NumCPUs=4 NumTasks=4 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=32000M,node=1,billing=7
   AllocTRES=cpu=4,mem=32000M,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc103 CPU_IDs=15,32,42-43 Mem=32000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/thnthi002/Alignment/Alignment2.sh
   WorkDir=/scratch/thnthi002/Alignment
   StdErr=/scratch/thnthi002/Alignment/slurm-37459.out
   StdIn=/dev/null
   StdOut=/scratch/thnthi002/Alignment/slurm-37459.out
   Power=

UCT HPC clusterJOB DETAILS FOR JOB 37459

captured Tue Oct 22 12:02:46 SAST 2024

JobId=37459 JobName=Alignment
   UserId=thnthi002(465176414 Thina Gcobo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7133 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=02:13:40 TimeLimit=3-18:00:00 TimeMin=N/A
   SubmitTime=2024-10-22T09:48:50 EligibleTime=2024-10-22T09:48:50
   AccrueTime=2024-10-22T09:48:50
   StartTime=2024-10-22T09:48:50 EndTime=2024-10-22T12:02:30 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-10-22T09:48:50 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:2489001
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc103
   BatchHost=srvrochpc103
   NumNodes=1 NumCPUs=4 NumTasks=4 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=32000M,node=1,billing=7
   AllocTRES=cpu=4,mem=32000M,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc103 CPU_IDs=15,32,42-43 Mem=32000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/thnthi002/Alignment/Alignment2.sh
   WorkDir=/scratch/thnthi002/Alignment
   StdErr=/scratch/thnthi002/Alignment/slurm-37459.out
   StdIn=/dev/null
   StdOut=/scratch/thnthi002/Alignment/slurm-37459.out
   Power=

UCT HPC clusterJOB DETAILS FOR JOB 37459

captured Tue Oct 22 12:03:02 SAST 2024

JobId=37459 JobName=Alignment
   UserId=thnthi002(465176414 Thina Gcobo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7133 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=02:13:40 TimeLimit=3-18:00:00 TimeMin=N/A
   SubmitTime=2024-10-22T09:48:50 EligibleTime=2024-10-22T09:48:50
   AccrueTime=2024-10-22T09:48:50
   StartTime=2024-10-22T09:48:50 EndTime=2024-10-22T12:02:30 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-10-22T09:48:50 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:2489001
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc103
   BatchHost=srvrochpc103
   NumNodes=1 NumCPUs=4 NumTasks=4 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=32000M,node=1,billing=7
   AllocTRES=cpu=4,mem=32000M,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc103 CPU_IDs=15,32,42-43 Mem=32000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/thnthi002/Alignment/Alignment2.sh
   WorkDir=/scratch/thnthi002/Alignment
   StdErr=/scratch/thnthi002/Alignment/slurm-37459.out
   StdIn=/dev/null
   StdOut=/scratch/thnthi002/Alignment/slurm-37459.out
   Power=

UCT HPC clusterJOB DETAILS FOR JOB 37459

captured Tue Oct 22 12:03:44 SAST 2024

JobId=37459 JobName=Alignment
   UserId=thnthi002(465176414 Thina Gcobo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7133 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=02:13:40 TimeLimit=3-18:00:00 TimeMin=N/A
   SubmitTime=2024-10-22T09:48:50 EligibleTime=2024-10-22T09:48:50
   AccrueTime=2024-10-22T09:48:50
   StartTime=2024-10-22T09:48:50 EndTime=2024-10-22T12:02:30 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-10-22T09:48:50 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:2489001
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc103
   BatchHost=srvrochpc103
   NumNodes=1 NumCPUs=4 NumTasks=4 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=32000M,node=1,billing=7
   AllocTRES=cpu=4,mem=32000M,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc103 CPU_IDs=15,32,42-43 Mem=32000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/thnthi002/Alignment/Alignment2.sh
   WorkDir=/scratch/thnthi002/Alignment
   StdErr=/scratch/thnthi002/Alignment/slurm-37459.out
   StdIn=/dev/null
   StdOut=/scratch/thnthi002/Alignment/slurm-37459.out
   Power=

UCT HPC clusterJOB DETAILS FOR JOB 37459

captured Tue Oct 22 12:04:01 SAST 2024

JobId=37459 JobName=Alignment
   UserId=thnthi002(465176414 Thina Gcobo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7133 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=02:13:40 TimeLimit=3-18:00:00 TimeMin=N/A
   SubmitTime=2024-10-22T09:48:50 EligibleTime=2024-10-22T09:48:50
   AccrueTime=2024-10-22T09:48:50
   StartTime=2024-10-22T09:48:50 EndTime=2024-10-22T12:02:30 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2024-10-22T09:48:50 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:2489001
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc103
   BatchHost=srvrochpc103
   NumNodes=1 NumCPUs=4 NumTasks=4 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=32000M,node=1,billing=7
   AllocTRES=cpu=4,mem=32000M,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc103 CPU_IDs=15,32,42-43 Mem=32000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/thnthi002/Alignment/Alignment2.sh
   WorkDir=/scratch/thnthi002/Alignment
   StdErr=/scratch/thnthi002/Alignment/slurm-37459.out
   StdIn=/dev/null
   StdOut=/scratch/thnthi002/Alignment/slurm-37459.out
   Power=