UCT HPC cluster

JOB DETAILS FOR JOB 300892

captured Tue Oct 7 16:55:01 SAST 2025

MaxRAM=83.8G
MaxVMSize=0G
AveCPUFreq=66K
AveDiskRead=11225233167+
AveDiskWrite=11137511881+

JobId=300892 JobName=RASA
   UserId=awnden001(292105637 Denis Awany) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7242 Nice=0 Account=pathology QOS=normal
   JobState=RUNNING Reason=None Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=0:0
   DerivedExitCode=0:0
   RunTime=00:36:22 TimeLimit=5-00:00:00 TimeMin=N/A
   SubmitTime=2025-10-07T16:18:39 EligibleTime=2025-10-07T16:18:39
   AccrueTime=2025-10-07T16:18:39
   StartTime=2025-10-07T16:18:39 EndTime=2025-10-12T16:18:39 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-10-07T16:18:39 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:3687398
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc109
   BatchHost=srvrochpc109
   NumNodes=1 NumCPUs=20 NumTasks=10 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80G,node=1,billing=18
   AllocTRES=cpu=20,mem=80G,node=1,billing=28
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc109 CPU_IDs=13-22,36-45 Mem=81920 GRES=
   MinCPUsNode=1 MinMemoryCPU=4G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/awnden001/rnaSeq/runPipeline/run_pipeline.sh
   WorkDir=/scratch/awnden001/rnaSeq/runPipeline
   StdErr=/scratch/awnden001/rnaSeq/runPipeline/slurm-300892.out
   StdIn=/dev/null
   StdOut=/scratch/awnden001/rnaSeq/runPipeline/slurm-300892.out
   Power=
   MailUser=awanydenis@gmail.com MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 300892

captured Tue Oct 7 16:55:41 SAST 2025

JobId=300892 JobName=RASA
   UserId=awnden001(292105637 Denis Awany) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7242 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:36:45 TimeLimit=5-00:00:00 TimeMin=N/A
   SubmitTime=2025-10-07T16:18:39 EligibleTime=2025-10-07T16:18:39
   AccrueTime=2025-10-07T16:18:39
   StartTime=2025-10-07T16:18:39 EndTime=2025-10-07T16:55:24 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-10-07T16:18:39 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:3687398
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc109
   BatchHost=srvrochpc109
   NumNodes=1 NumCPUs=20 NumTasks=10 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80G,node=1,billing=18
   AllocTRES=cpu=20,mem=80G,node=1,billing=28
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc109 CPU_IDs=13-22,36-45 Mem=81920 GRES=
   MinCPUsNode=1 MinMemoryCPU=4G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/awnden001/rnaSeq/runPipeline/run_pipeline.sh
   WorkDir=/scratch/awnden001/rnaSeq/runPipeline
   StdErr=/scratch/awnden001/rnaSeq/runPipeline/slurm-300892.out
   StdIn=/dev/null
   StdOut=/scratch/awnden001/rnaSeq/runPipeline/slurm-300892.out
   Power=
   MailUser=awanydenis@gmail.com MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 300892

captured Tue Oct 7 16:56:01 SAST 2025

JobId=300892 JobName=RASA
   UserId=awnden001(292105637 Denis Awany) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7242 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:36:45 TimeLimit=5-00:00:00 TimeMin=N/A
   SubmitTime=2025-10-07T16:18:39 EligibleTime=2025-10-07T16:18:39
   AccrueTime=2025-10-07T16:18:39
   StartTime=2025-10-07T16:18:39 EndTime=2025-10-07T16:55:24 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-10-07T16:18:39 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:3687398
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc109
   BatchHost=srvrochpc109
   NumNodes=1 NumCPUs=20 NumTasks=10 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80G,node=1,billing=18
   AllocTRES=cpu=20,mem=80G,node=1,billing=28
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc109 CPU_IDs=13-22,36-45 Mem=81920 GRES=
   MinCPUsNode=1 MinMemoryCPU=4G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/awnden001/rnaSeq/runPipeline/run_pipeline.sh
   WorkDir=/scratch/awnden001/rnaSeq/runPipeline
   StdErr=/scratch/awnden001/rnaSeq/runPipeline/slurm-300892.out
   StdIn=/dev/null
   StdOut=/scratch/awnden001/rnaSeq/runPipeline/slurm-300892.out
   Power=
   MailUser=awanydenis@gmail.com MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 300892

captured Tue Oct 7 16:56:43 SAST 2025

JobId=300892 JobName=RASA
   UserId=awnden001(292105637 Denis Awany) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7242 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:36:45 TimeLimit=5-00:00:00 TimeMin=N/A
   SubmitTime=2025-10-07T16:18:39 EligibleTime=2025-10-07T16:18:39
   AccrueTime=2025-10-07T16:18:39
   StartTime=2025-10-07T16:18:39 EndTime=2025-10-07T16:55:24 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-10-07T16:18:39 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:3687398
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc109
   BatchHost=srvrochpc109
   NumNodes=1 NumCPUs=20 NumTasks=10 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80G,node=1,billing=18
   AllocTRES=cpu=20,mem=80G,node=1,billing=28
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc109 CPU_IDs=13-22,36-45 Mem=81920 GRES=
   MinCPUsNode=1 MinMemoryCPU=4G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/awnden001/rnaSeq/runPipeline/run_pipeline.sh
   WorkDir=/scratch/awnden001/rnaSeq/runPipeline
   StdErr=/scratch/awnden001/rnaSeq/runPipeline/slurm-300892.out
   StdIn=/dev/null
   StdOut=/scratch/awnden001/rnaSeq/runPipeline/slurm-300892.out
   Power=
   MailUser=awanydenis@gmail.com MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 300892

captured Tue Oct 7 16:57:01 SAST 2025

JobId=300892 JobName=RASA
   UserId=awnden001(292105637 Denis Awany) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7242 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:36:45 TimeLimit=5-00:00:00 TimeMin=N/A
   SubmitTime=2025-10-07T16:18:39 EligibleTime=2025-10-07T16:18:39
   AccrueTime=2025-10-07T16:18:39
   StartTime=2025-10-07T16:18:39 EndTime=2025-10-07T16:55:24 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-10-07T16:18:39 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:3687398
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc109
   BatchHost=srvrochpc109
   NumNodes=1 NumCPUs=20 NumTasks=10 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80G,node=1,billing=18
   AllocTRES=cpu=20,mem=80G,node=1,billing=28
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc109 CPU_IDs=13-22,36-45 Mem=81920 GRES=
   MinCPUsNode=1 MinMemoryCPU=4G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/awnden001/rnaSeq/runPipeline/run_pipeline.sh
   WorkDir=/scratch/awnden001/rnaSeq/runPipeline
   StdErr=/scratch/awnden001/rnaSeq/runPipeline/slurm-300892.out
   StdIn=/dev/null
   StdOut=/scratch/awnden001/rnaSeq/runPipeline/slurm-300892.out
   Power=
   MailUser=awanydenis@gmail.com MailType=BEGIN,END,FAIL