UCT HPC cluster

JOB DETAILS FOR JOB 163305

captured Mon Jun 16 18:58:43 SAST 2025

JobId=163305 JobName=nf-deduplicate_cdhit_gather
   UserId=gchrac001(1221942471 Rachael Gachogo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7304 Nice=0 Account=pathology QOS=normal
   JobState=COMPLETED Reason=None Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=0:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:58:18 EligibleTime=2025-06-16T18:58:18
   AccrueTime=2025-06-16T18:58:18
   StartTime=2025-06-16T18:58:20 EndTime=2025-06-16T18:58:21 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:58:20 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1391882
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc101
   BatchHost=srvrochpc101
   NumNodes=1 NumCPUs=4 NumTasks=1 CPUs/Task=4 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=30G,node=1,billing=7
   AllocTRES=cpu=4,mem=30G,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc101 CPU_IDs=24,30-32 Mem=30720 GRES=
   MinCPUsNode=4 MinMemoryNode=30G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f/.command.log
   Power=
   TresPerTask=cpu:4

UCT HPC clusterJOB DETAILS FOR JOB 163305

captured Mon Jun 16 18:59:01 SAST 2025

JobId=163305 JobName=nf-deduplicate_cdhit_gather
   UserId=gchrac001(1221942471 Rachael Gachogo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7304 Nice=0 Account=pathology QOS=normal
   JobState=COMPLETED Reason=None Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=0:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:58:18 EligibleTime=2025-06-16T18:58:18
   AccrueTime=2025-06-16T18:58:18
   StartTime=2025-06-16T18:58:20 EndTime=2025-06-16T18:58:21 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:58:20 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1391882
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc101
   BatchHost=srvrochpc101
   NumNodes=1 NumCPUs=4 NumTasks=1 CPUs/Task=4 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=30G,node=1,billing=7
   AllocTRES=cpu=4,mem=30G,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc101 CPU_IDs=24,30-32 Mem=30720 GRES=
   MinCPUsNode=4 MinMemoryNode=30G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f/.command.log
   Power=
   TresPerTask=cpu:4

UCT HPC clusterJOB DETAILS FOR JOB 163305

captured Mon Jun 16 18:59:44 SAST 2025

JobId=163305 JobName=nf-deduplicate_cdhit_gather
   UserId=gchrac001(1221942471 Rachael Gachogo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7304 Nice=0 Account=pathology QOS=normal
   JobState=COMPLETED Reason=None Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=0:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:58:18 EligibleTime=2025-06-16T18:58:18
   AccrueTime=2025-06-16T18:58:18
   StartTime=2025-06-16T18:58:20 EndTime=2025-06-16T18:58:21 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:58:20 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1391882
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc101
   BatchHost=srvrochpc101
   NumNodes=1 NumCPUs=4 NumTasks=1 CPUs/Task=4 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=30G,node=1,billing=7
   AllocTRES=cpu=4,mem=30G,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc101 CPU_IDs=24,30-32 Mem=30720 GRES=
   MinCPUsNode=4 MinMemoryNode=30G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f/.command.log
   Power=
   TresPerTask=cpu:4

UCT HPC clusterJOB DETAILS FOR JOB 163305

captured Mon Jun 16 19:00:01 SAST 2025

JobId=163305 JobName=nf-deduplicate_cdhit_gather
   UserId=gchrac001(1221942471 Rachael Gachogo) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7304 Nice=0 Account=pathology QOS=normal
   JobState=COMPLETED Reason=None Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=0:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:58:18 EligibleTime=2025-06-16T18:58:18
   AccrueTime=2025-06-16T18:58:18
   StartTime=2025-06-16T18:58:20 EndTime=2025-06-16T18:58:21 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:58:20 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1391882
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc101
   BatchHost=srvrochpc101
   NumNodes=1 NumCPUs=4 NumTasks=1 CPUs/Task=4 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=4,mem=30G,node=1,billing=7
   AllocTRES=cpu=4,mem=30G,node=1,billing=7
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc101 CPU_IDs=24,30-32 Mem=30720 GRES=
   MinCPUsNode=4 MinMemoryNode=30G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/4e/e81240431e7eb3c90f8222ae52599f/.command.log
   Power=
   TresPerTask=cpu:4