UCT HPC cluster

JOB DETAILS FOR JOB 162996

captured Mon Jun 16 18:54:01 SAST 2025

JobId=162996 JobName=nf-download_genes_getDatasets_(GCF_000864245.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7301 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=2:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:53:58 EligibleTime=2025-06-16T18:53:58
   AccrueTime=2025-06-16T18:53:58
   StartTime=2025-06-16T18:53:59 EndTime=2025-06-16T18:54:00 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:53:59 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1391882
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc100
   BatchHost=srvrochpc100
   NumNodes=1 NumCPUs=2 NumTasks=1 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=2,mem=12G,node=1,billing=3
   AllocTRES=cpu=2,mem=12G,node=1,billing=3
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc100 CPU_IDs=10,23 Mem=12288 GRES=
   MinCPUsNode=2 MinMemoryNode=12G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c/.command.log
   Power=
   TresPerTask=cpu:2

UCT HPC clusterJOB DETAILS FOR JOB 162996

captured Mon Jun 16 18:54:43 SAST 2025

JobId=162996 JobName=nf-download_genes_getDatasets_(GCF_000864245.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7301 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=2:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:53:58 EligibleTime=2025-06-16T18:53:58
   AccrueTime=2025-06-16T18:53:58
   StartTime=2025-06-16T18:53:59 EndTime=2025-06-16T18:54:00 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:53:59 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1391882
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc100
   BatchHost=srvrochpc100
   NumNodes=1 NumCPUs=2 NumTasks=1 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=2,mem=12G,node=1,billing=3
   AllocTRES=cpu=2,mem=12G,node=1,billing=3
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc100 CPU_IDs=10,23 Mem=12288 GRES=
   MinCPUsNode=2 MinMemoryNode=12G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c/.command.log
   Power=
   TresPerTask=cpu:2

UCT HPC clusterJOB DETAILS FOR JOB 162996

captured Mon Jun 16 18:55:02 SAST 2025

JobId=162996 JobName=nf-download_genes_getDatasets_(GCF_000864245.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7301 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=2:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:53:58 EligibleTime=2025-06-16T18:53:58
   AccrueTime=2025-06-16T18:53:58
   StartTime=2025-06-16T18:53:59 EndTime=2025-06-16T18:54:00 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:53:59 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1391882
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc100
   BatchHost=srvrochpc100
   NumNodes=1 NumCPUs=2 NumTasks=1 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=2,mem=12G,node=1,billing=3
   AllocTRES=cpu=2,mem=12G,node=1,billing=3
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc100 CPU_IDs=10,23 Mem=12288 GRES=
   MinCPUsNode=2 MinMemoryNode=12G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c/.command.log
   Power=
   TresPerTask=cpu:2

UCT HPC clusterJOB DETAILS FOR JOB 162996

captured Mon Jun 16 18:55:44 SAST 2025

JobId=162996 JobName=nf-download_genes_getDatasets_(GCF_000864245.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7301 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=2:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:53:58 EligibleTime=2025-06-16T18:53:58
   AccrueTime=2025-06-16T18:53:58
   StartTime=2025-06-16T18:53:59 EndTime=2025-06-16T18:54:00 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:53:59 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1391882
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc100
   BatchHost=srvrochpc100
   NumNodes=1 NumCPUs=2 NumTasks=1 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=2,mem=12G,node=1,billing=3
   AllocTRES=cpu=2,mem=12G,node=1,billing=3
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc100 CPU_IDs=10,23 Mem=12288 GRES=
   MinCPUsNode=2 MinMemoryNode=12G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c/.command.log
   Power=
   TresPerTask=cpu:2

UCT HPC clusterJOB DETAILS FOR JOB 162996

captured Mon Jun 16 18:56:01 SAST 2025

JobId=162996 JobName=nf-download_genes_getDatasets_(GCF_000864245.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7301 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=2:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:53:58 EligibleTime=2025-06-16T18:53:58
   AccrueTime=2025-06-16T18:53:58
   StartTime=2025-06-16T18:53:59 EndTime=2025-06-16T18:54:00 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:53:59 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1391882
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc100
   BatchHost=srvrochpc100
   NumNodes=1 NumCPUs=2 NumTasks=1 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=2,mem=12G,node=1,billing=3
   AllocTRES=cpu=2,mem=12G,node=1,billing=3
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc100 CPU_IDs=10,23 Mem=12288 GRES=
   MinCPUsNode=2 MinMemoryNode=12G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/a4/adac67ea7d76e804984770a609d26c/.command.log
   Power=
   TresPerTask=cpu:2