UCT HPC cluster

JOB DETAILS FOR JOB 162118

captured Mon Jun 16 18:35:44 SAST 2025

JobId=162118 JobName=nf-download_genomes_getDatasets_(GCF_006400995.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7302 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:02 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:35:29 EligibleTime=2025-06-16T18:35:29
   AccrueTime=2025-06-16T18:35:29
   StartTime=2025-06-16T18:35:29 EndTime=2025-06-16T18:35:31 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:35:29 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1330942
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc102
   BatchHost=srvrochpc102
   NumNodes=1 NumCPUs=3 NumTasks=1 CPUs/Task=3 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=3,mem=18G,node=1,billing=4
   AllocTRES=cpu=3,mem=18G,node=1,billing=4
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc102 CPU_IDs=22-23,45 Mem=18432 GRES=
   MinCPUsNode=3 MinMemoryNode=18G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed/.command.log
   Power=
   TresPerTask=cpu:3

UCT HPC clusterJOB DETAILS FOR JOB 162118

captured Mon Jun 16 18:36:01 SAST 2025

JobId=162118 JobName=nf-download_genomes_getDatasets_(GCF_006400995.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7302 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:02 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:35:29 EligibleTime=2025-06-16T18:35:29
   AccrueTime=2025-06-16T18:35:29
   StartTime=2025-06-16T18:35:29 EndTime=2025-06-16T18:35:31 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:35:29 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1330942
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc102
   BatchHost=srvrochpc102
   NumNodes=1 NumCPUs=3 NumTasks=1 CPUs/Task=3 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=3,mem=18G,node=1,billing=4
   AllocTRES=cpu=3,mem=18G,node=1,billing=4
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc102 CPU_IDs=22-23,45 Mem=18432 GRES=
   MinCPUsNode=3 MinMemoryNode=18G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed/.command.log
   Power=
   TresPerTask=cpu:3

UCT HPC clusterJOB DETAILS FOR JOB 162118

captured Mon Jun 16 18:36:44 SAST 2025

JobId=162118 JobName=nf-download_genomes_getDatasets_(GCF_006400995.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7302 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:02 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:35:29 EligibleTime=2025-06-16T18:35:29
   AccrueTime=2025-06-16T18:35:29
   StartTime=2025-06-16T18:35:29 EndTime=2025-06-16T18:35:31 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:35:29 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1330942
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc102
   BatchHost=srvrochpc102
   NumNodes=1 NumCPUs=3 NumTasks=1 CPUs/Task=3 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=3,mem=18G,node=1,billing=4
   AllocTRES=cpu=3,mem=18G,node=1,billing=4
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc102 CPU_IDs=22-23,45 Mem=18432 GRES=
   MinCPUsNode=3 MinMemoryNode=18G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed/.command.log
   Power=
   TresPerTask=cpu:3

UCT HPC clusterJOB DETAILS FOR JOB 162118

captured Mon Jun 16 18:37:01 SAST 2025

JobId=162118 JobName=nf-download_genomes_getDatasets_(GCF_006400995.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7302 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:02 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:35:29 EligibleTime=2025-06-16T18:35:29
   AccrueTime=2025-06-16T18:35:29
   StartTime=2025-06-16T18:35:29 EndTime=2025-06-16T18:35:31 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:35:29 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1330942
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc102
   BatchHost=srvrochpc102
   NumNodes=1 NumCPUs=3 NumTasks=1 CPUs/Task=3 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=3,mem=18G,node=1,billing=4
   AllocTRES=cpu=3,mem=18G,node=1,billing=4
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc102 CPU_IDs=22-23,45 Mem=18432 GRES=
   MinCPUsNode=3 MinMemoryNode=18G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/0e/7703bebff6ac69ac1b019878e6cbed/.command.log
   Power=
   TresPerTask=cpu:3