UCT HPC cluster

JOB DETAILS FOR JOB 161834

captured Mon Jun 16 18:35:02 SAST 2025

JobId=161834 JobName=nf-download_genomes_getDatasets_(GCF_000845945.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7300 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:34:58 EligibleTime=2025-06-16T18:34:58
   AccrueTime=2025-06-16T18:34:58
   StartTime=2025-06-16T18:34:59 EndTime=2025-06-16T18:35:00 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:34:59 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1330942
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc101
   BatchHost=srvrochpc101
   NumNodes=1 NumCPUs=1 NumTasks=1 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=1,mem=6G,node=1,billing=1
   AllocTRES=cpu=1,mem=6G,node=1,billing=1
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc101 CPU_IDs=32 Mem=6144 GRES=
   MinCPUsNode=1 MinMemoryNode=6G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4/.command.log
   Power=

UCT HPC clusterJOB DETAILS FOR JOB 161834

captured Mon Jun 16 18:35:44 SAST 2025

JobId=161834 JobName=nf-download_genomes_getDatasets_(GCF_000845945.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7300 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:34:58 EligibleTime=2025-06-16T18:34:58
   AccrueTime=2025-06-16T18:34:58
   StartTime=2025-06-16T18:34:59 EndTime=2025-06-16T18:35:00 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:34:59 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1330942
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc101
   BatchHost=srvrochpc101
   NumNodes=1 NumCPUs=1 NumTasks=1 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=1,mem=6G,node=1,billing=1
   AllocTRES=cpu=1,mem=6G,node=1,billing=1
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc101 CPU_IDs=32 Mem=6144 GRES=
   MinCPUsNode=1 MinMemoryNode=6G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4/.command.log
   Power=

UCT HPC clusterJOB DETAILS FOR JOB 161834

captured Mon Jun 16 18:36:01 SAST 2025

JobId=161834 JobName=nf-download_genomes_getDatasets_(GCF_000845945.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7300 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:34:58 EligibleTime=2025-06-16T18:34:58
   AccrueTime=2025-06-16T18:34:58
   StartTime=2025-06-16T18:34:59 EndTime=2025-06-16T18:35:00 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:34:59 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1330942
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc101
   BatchHost=srvrochpc101
   NumNodes=1 NumCPUs=1 NumTasks=1 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=1,mem=6G,node=1,billing=1
   AllocTRES=cpu=1,mem=6G,node=1,billing=1
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc101 CPU_IDs=32 Mem=6144 GRES=
   MinCPUsNode=1 MinMemoryNode=6G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4/.command.log
   Power=

UCT HPC clusterJOB DETAILS FOR JOB 161834

captured Mon Jun 16 18:36:44 SAST 2025

JobId=161834 JobName=nf-download_genomes_getDatasets_(GCF_000845945.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7300 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:34:58 EligibleTime=2025-06-16T18:34:58
   AccrueTime=2025-06-16T18:34:58
   StartTime=2025-06-16T18:34:59 EndTime=2025-06-16T18:35:00 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:34:59 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1330942
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc101
   BatchHost=srvrochpc101
   NumNodes=1 NumCPUs=1 NumTasks=1 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=1,mem=6G,node=1,billing=1
   AllocTRES=cpu=1,mem=6G,node=1,billing=1
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc101 CPU_IDs=32 Mem=6144 GRES=
   MinCPUsNode=1 MinMemoryNode=6G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4/.command.log
   Power=

UCT HPC clusterJOB DETAILS FOR JOB 161834

captured Mon Jun 16 18:37:01 SAST 2025

JobId=161834 JobName=nf-download_genomes_getDatasets_(GCF_000845945.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7300 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T18:34:58 EligibleTime=2025-06-16T18:34:58
   AccrueTime=2025-06-16T18:34:58
   StartTime=2025-06-16T18:34:59 EndTime=2025-06-16T18:35:00 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T18:34:59 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:1330942
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc101
   BatchHost=srvrochpc101
   NumNodes=1 NumCPUs=1 NumTasks=1 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=1,mem=6G,node=1,billing=1
   AllocTRES=cpu=1,mem=6G,node=1,billing=1
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc101 CPU_IDs=32 Mem=6144 GRES=
   MinCPUsNode=1 MinMemoryNode=6G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/72/e3acf54b413698ae7954d6c1f337f4/.command.log
   Power=