UCT HPC cluster

JOB DETAILS FOR JOB 161448

captured Mon Jun 16 17:04:38 SAST 2025

JobId=161448 JobName=nf-download_genomes_getDatasets_(GCF_000846685.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7301 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T17:04:02 EligibleTime=2025-06-16T17:04:02
   AccrueTime=2025-06-16T17:04:02
   StartTime=2025-06-16T17:04:03 EndTime=2025-06-16T17:04:04 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T17:04:03 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:718181
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc103
   BatchHost=srvrochpc103
   NumNodes=1 NumCPUs=2 NumTasks=1 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=2,mem=12G,node=1,billing=3
   AllocTRES=cpu=2,mem=12G,node=1,billing=3
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc103 CPU_IDs=22-23 Mem=12288 GRES=
   MinCPUsNode=2 MinMemoryNode=12G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e/.command.log
   Power=
   TresPerTask=cpu:2

UCT HPC clusterJOB DETAILS FOR JOB 161448

captured Mon Jun 16 17:05:01 SAST 2025

JobId=161448 JobName=nf-download_genomes_getDatasets_(GCF_000846685.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7301 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T17:04:02 EligibleTime=2025-06-16T17:04:02
   AccrueTime=2025-06-16T17:04:02
   StartTime=2025-06-16T17:04:03 EndTime=2025-06-16T17:04:04 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T17:04:03 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:718181
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc103
   BatchHost=srvrochpc103
   NumNodes=1 NumCPUs=2 NumTasks=1 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=2,mem=12G,node=1,billing=3
   AllocTRES=cpu=2,mem=12G,node=1,billing=3
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc103 CPU_IDs=22-23 Mem=12288 GRES=
   MinCPUsNode=2 MinMemoryNode=12G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e/.command.log
   Power=
   TresPerTask=cpu:2

UCT HPC clusterJOB DETAILS FOR JOB 161448

captured Mon Jun 16 17:05:44 SAST 2025

JobId=161448 JobName=nf-download_genomes_getDatasets_(GCF_000846685.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7301 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T17:04:02 EligibleTime=2025-06-16T17:04:02
   AccrueTime=2025-06-16T17:04:02
   StartTime=2025-06-16T17:04:03 EndTime=2025-06-16T17:04:04 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T17:04:03 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:718181
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc103
   BatchHost=srvrochpc103
   NumNodes=1 NumCPUs=2 NumTasks=1 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=2,mem=12G,node=1,billing=3
   AllocTRES=cpu=2,mem=12G,node=1,billing=3
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc103 CPU_IDs=22-23 Mem=12288 GRES=
   MinCPUsNode=2 MinMemoryNode=12G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e/.command.log
   Power=
   TresPerTask=cpu:2

UCT HPC clusterJOB DETAILS FOR JOB 161448

captured Mon Jun 16 17:06:01 SAST 2025

JobId=161448 JobName=nf-download_genomes_getDatasets_(GCF_000846685.1 )
   UserId=gchrac001(1221942471) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7301 Nice=0 Account=pathology QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=0 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:00:01 TimeLimit=8-08:00:00 TimeMin=N/A
   SubmitTime=2025-06-16T17:04:02 EligibleTime=2025-06-16T17:04:02
   AccrueTime=2025-06-16T17:04:02
   StartTime=2025-06-16T17:04:03 EndTime=2025-06-16T17:04:04 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-06-16T17:04:03 Scheduler=Main
   Partition=ada AllocNode:Sid=srvrochpc001.uct.ac.za:718181
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc103
   BatchHost=srvrochpc103
   NumNodes=1 NumCPUs=2 NumTasks=1 CPUs/Task=2 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=2,mem=12G,node=1,billing=3
   AllocTRES=cpu=2,mem=12G,node=1,billing=3
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc103 CPU_IDs=22-23 Mem=12288 GRES=
   MinCPUsNode=2 MinMemoryNode=12G MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=.command.run
   WorkDir=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e
   StdErr=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e/.command.log
   StdIn=/dev/null
   StdOut=/scratch/gchrac001/pangeome_analysis/build_pangenome_25022025/work/33/6991712d2f829432e017f766eb585e/.command.log
   Power=
   TresPerTask=cpu:2