UCT HPC cluster

JOB DETAILS FOR JOB 152909

captured Fri May 30 16:56:01 SAST 2025

MaxRAM=10.9G
MaxVMSize=0G
AveCPUFreq=3.30M
AveDiskRead=8813916867
AveDiskWrite=6274558426

JobId=152909 JobName=snp-filter
   UserId=prktha005(1022176126 Thaabiet Parker) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7400 Nice=0 Account=biosci QOS=normal
   JobState=RUNNING Reason=None Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=0:0
   DerivedExitCode=0:0
   RunTime=00:00:58 TimeLimit=03:00:00 TimeMin=N/A
   SubmitTime=2025-05-30T16:55:03 EligibleTime=2025-05-30T16:55:03
   AccrueTime=2025-05-30T16:55:03
   StartTime=2025-05-30T16:55:03 EndTime=2025-05-30T19:55:03 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-05-30T16:55:03 Scheduler=Backfill
   Partition=ada AllocNode:Sid=srvrochpc101:3534576
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc104
   BatchHost=srvrochpc104
   NumNodes=1 NumCPUs=10 NumTasks=10 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80000M,node=1,billing=17
   AllocTRES=cpu=10,mem=80000M,node=1,billing=17
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc104 CPU_IDs=15-19,39-43 Mem=80000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/sans-outgroups-snp-filter.sh
   WorkDir=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups
   StdErr=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/slurm-152909.out
   StdIn=/dev/null
   StdOut=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/slurm-152909.out
   Power=
   MailUser=PRKTHA005@myuct.ac.za MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 152909

captured Fri May 30 16:56:32 SAST 2025

JobId=152909 JobName=snp-filter
   UserId=prktha005(1022176126 Thaabiet Parker) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7400 Nice=0 Account=biosci QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:01:23 TimeLimit=03:00:00 TimeMin=N/A
   SubmitTime=2025-05-30T16:55:03 EligibleTime=2025-05-30T16:55:03
   AccrueTime=2025-05-30T16:55:03
   StartTime=2025-05-30T16:55:03 EndTime=2025-05-30T16:56:26 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-05-30T16:55:03 Scheduler=Backfill
   Partition=ada AllocNode:Sid=srvrochpc101:3534576
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc104
   BatchHost=srvrochpc104
   NumNodes=1 NumCPUs=10 NumTasks=10 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80000M,node=1,billing=17
   AllocTRES=cpu=10,mem=80000M,node=1,billing=17
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc104 CPU_IDs=15-19,39-43 Mem=80000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/sans-outgroups-snp-filter.sh
   WorkDir=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups
   StdErr=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/slurm-152909.out
   StdIn=/dev/null
   StdOut=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/slurm-152909.out
   Power=
   MailUser=PRKTHA005@myuct.ac.za MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 152909

captured Fri May 30 16:57:01 SAST 2025

JobId=152909 JobName=snp-filter
   UserId=prktha005(1022176126 Thaabiet Parker) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7400 Nice=0 Account=biosci QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:01:23 TimeLimit=03:00:00 TimeMin=N/A
   SubmitTime=2025-05-30T16:55:03 EligibleTime=2025-05-30T16:55:03
   AccrueTime=2025-05-30T16:55:03
   StartTime=2025-05-30T16:55:03 EndTime=2025-05-30T16:56:26 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-05-30T16:55:03 Scheduler=Backfill
   Partition=ada AllocNode:Sid=srvrochpc101:3534576
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc104
   BatchHost=srvrochpc104
   NumNodes=1 NumCPUs=10 NumTasks=10 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80000M,node=1,billing=17
   AllocTRES=cpu=10,mem=80000M,node=1,billing=17
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc104 CPU_IDs=15-19,39-43 Mem=80000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/sans-outgroups-snp-filter.sh
   WorkDir=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups
   StdErr=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/slurm-152909.out
   StdIn=/dev/null
   StdOut=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/slurm-152909.out
   Power=
   MailUser=PRKTHA005@myuct.ac.za MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 152909

captured Fri May 30 16:57:32 SAST 2025

JobId=152909 JobName=snp-filter
   UserId=prktha005(1022176126 Thaabiet Parker) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7400 Nice=0 Account=biosci QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:01:23 TimeLimit=03:00:00 TimeMin=N/A
   SubmitTime=2025-05-30T16:55:03 EligibleTime=2025-05-30T16:55:03
   AccrueTime=2025-05-30T16:55:03
   StartTime=2025-05-30T16:55:03 EndTime=2025-05-30T16:56:26 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-05-30T16:55:03 Scheduler=Backfill
   Partition=ada AllocNode:Sid=srvrochpc101:3534576
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc104
   BatchHost=srvrochpc104
   NumNodes=1 NumCPUs=10 NumTasks=10 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80000M,node=1,billing=17
   AllocTRES=cpu=10,mem=80000M,node=1,billing=17
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc104 CPU_IDs=15-19,39-43 Mem=80000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/sans-outgroups-snp-filter.sh
   WorkDir=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups
   StdErr=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/slurm-152909.out
   StdIn=/dev/null
   StdOut=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/slurm-152909.out
   Power=
   MailUser=PRKTHA005@myuct.ac.za MailType=BEGIN,END,FAIL

UCT HPC clusterJOB DETAILS FOR JOB 152909

captured Fri May 30 16:58:02 SAST 2025

JobId=152909 JobName=snp-filter
   UserId=prktha005(1022176126 Thaabiet Parker) GroupId=eresearch_hpc_users(1221947160) MCS_label=N/A
   Priority=7400 Nice=0 Account=biosci QOS=normal
   JobState=FAILED Reason=NonZeroExitCode Dependency=(null)
   Requeue=1 Restarts=0 BatchFlag=1 Reboot=0 ExitCode=1:0
   DerivedExitCode=0:0
   RunTime=00:01:23 TimeLimit=03:00:00 TimeMin=N/A
   SubmitTime=2025-05-30T16:55:03 EligibleTime=2025-05-30T16:55:03
   AccrueTime=2025-05-30T16:55:03
   StartTime=2025-05-30T16:55:03 EndTime=2025-05-30T16:56:26 Deadline=N/A
   SuspendTime=None SecsPreSuspend=0 LastSchedEval=2025-05-30T16:55:03 Scheduler=Backfill
   Partition=ada AllocNode:Sid=srvrochpc101:3534576
   ReqNodeList=(null) ExcNodeList=(null)
   NodeList=srvrochpc104
   BatchHost=srvrochpc104
   NumNodes=1 NumCPUs=10 NumTasks=10 CPUs/Task=1 ReqB:S:C:T=0:0:*:*
   ReqTRES=cpu=10,mem=80000M,node=1,billing=17
   AllocTRES=cpu=10,mem=80000M,node=1,billing=17
   Socks/Node=* NtasksPerN:B:S:C=0:0:*:* CoreSpec=*
   JOB_GRES=(null)
     Nodes=srvrochpc104 CPU_IDs=15-19,39-43 Mem=80000 GRES=
   MinCPUsNode=1 MinMemoryCPU=8000M MinTmpDiskNode=0
   Features=(null) DelayBoot=00:00:00
   OverSubscribe=OK Contiguous=0 Licenses=(null) Network=(null)
   Command=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/sans-outgroups-snp-filter.sh
   WorkDir=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups
   StdErr=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/slurm-152909.out
   StdIn=/dev/null
   StdOut=/scratch/prktha005/pipelines/gbs/02b-sort/may2025-redo/sans-outgroups/slurm-152909.out
   Power=
   MailUser=PRKTHA005@myuct.ac.za MailType=BEGIN,END,FAIL